Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 AA543401-201ENSMUST00000164248 1269 ntBASIC16.4■□□□□ 0.22
Samm50Q8BGH2 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Samm50Q8BGH2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Samm50Q8BGH2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Samm50Q8BGH2 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.39■□□□□ 0.21
Samm50Q8BGH2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Gm8410-201ENSMUST00000117225 605 ntBASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Gm9182-201ENSMUST00000217829 639 ntBASIC16.39■□□□□ 0.21
Samm50Q8BGH2 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Grk6-205ENSMUST00000224653 2976 ntBASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.39■□□□□ 0.21
Samm50Q8BGH2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Samm50Q8BGH2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Gm6415-201ENSMUST00000118488 348 ntBASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Samm50Q8BGH2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms