Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.63□□□□□ -0.23
Trim50Q810I2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim50Q810I2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Trim50Q810I2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.63□□□□□ -0.23
Trim50Q810I2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim50Q810I2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.63□□□□□ -0.23
Trim50Q810I2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trim50Q810I2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.62□□□□□ -0.23
Trim50Q810I2 Gm6888-201ENSMUST00000221983 706 ntBASIC13.62□□□□□ -0.23
Trim50Q810I2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim50Q810I2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim50Q810I2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Gm13223-201ENSMUST00000118609 747 ntBASIC13.61□□□□□ -0.23
Trim50Q810I2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.61□□□□□ -0.23
Trim50Q810I2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.61□□□□□ -0.23
Trim50Q810I2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.61□□□□□ -0.23
Trim50Q810I2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.61□□□□□ -0.23
Trim50Q810I2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Gm46209-201ENSMUST00000217912 553 ntBASIC13.61□□□□□ -0.23
Trim50Q810I2 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.61□□□□□ -0.23
Trim50Q810I2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim50Q810I2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim50Q810I2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms