Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh8Q7TSK3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh8Q7TSK3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh8Q7TSK3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.77□□□□□ -0.2
Pcdh8Q7TSK3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Mir6392-201ENSMUST00000184924 108 ntBASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gm45668-201ENSMUST00000211271 493 ntBASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gm9908-201ENSMUST00000211534 448 ntBASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gm19220-201ENSMUST00000222682 803 ntBASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh8Q7TSK3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gm11478-201ENSMUST00000117851 599 ntBASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gm4804-201ENSMUST00000182234 999 ntBASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms