Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.37□□□□□ -0.59
Vma21Q78T54 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.37□□□□□ -0.59
Vma21Q78T54 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.37□□□□□ -0.59
Vma21Q78T54 Matn2-206ENSMUST00000228570 2798 ntBASIC11.37□□□□□ -0.59
Vma21Q78T54 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.36□□□□□ -0.59
Vma21Q78T54 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.36□□□□□ -0.59
Vma21Q78T54 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Gm12260-201ENSMUST00000122447 411 ntBASIC11.36□□□□□ -0.59
Vma21Q78T54 Gm11025-201ENSMUST00000140773 466 ntBASIC11.36□□□□□ -0.59
Vma21Q78T54 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vma21Q78T54 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vma21Q78T54 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.36□□□□□ -0.59
Vma21Q78T54 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.36□□□□□ -0.59
Vma21Q78T54 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.36□□□□□ -0.59
Vma21Q78T54 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.36□□□□□ -0.59
Vma21Q78T54 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.36□□□□□ -0.59
Vma21Q78T54 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vma21Q78T54 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Vma21Q78T54 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Vma21Q78T54 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.35□□□□□ -0.59
Vma21Q78T54 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Mir3113-201ENSMUST00000175478 76 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.35□□□□□ -0.59
Vma21Q78T54 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 Gm44608-201ENSMUST00000206827 855 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 Gm5364-201ENSMUST00000216789 889 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.35□□□□□ -0.59
Vma21Q78T54 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.35□□□□□ -0.59
Vma21Q78T54 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Vma21Q78T54 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.35□□□□□ -0.59
Vma21Q78T54 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.35□□□□□ -0.59
Vma21Q78T54 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Vma21Q78T54 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Vma21Q78T54 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Vma21Q78T54 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms