Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scube3Q66PY1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scube3Q66PY1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scube3Q66PY1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.71□□□□□ -0.05
Scube3Q66PY1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.71□□□□□ -0.05
Scube3Q66PY1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scube3Q66PY1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scube3Q66PY1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scube3Q66PY1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Scube3Q66PY1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scube3Q66PY1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Gm27437-201ENSMUST00000183429 107 ntBASIC14.7□□□□□ -0.06
Scube3Q66PY1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Gm7730-201ENSMUST00000212486 454 ntBASIC14.7□□□□□ -0.06
Scube3Q66PY1 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.7□□□□□ -0.06
Scube3Q66PY1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scube3Q66PY1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Gm12439-201ENSMUST00000117162 365 ntBASIC14.69□□□□□ -0.06
Scube3Q66PY1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Gm4804-201ENSMUST00000182234 999 ntBASIC14.69□□□□□ -0.06
Scube3Q66PY1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.69□□□□□ -0.06
Scube3Q66PY1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.69□□□□□ -0.06
Scube3Q66PY1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Gm2423-201ENSMUST00000074863 733 ntBASIC14.69□□□□□ -0.06
Scube3Q66PY1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scube3Q66PY1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.68□□□□□ -0.06
Scube3Q66PY1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.68□□□□□ -0.06
Scube3Q66PY1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scube3Q66PY1 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms