Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Gm11918-201ENSMUST00000121660 179 ntBASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shroom1Q5SX79 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shroom1Q5SX79 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Gm15806-201ENSMUST00000120696 955 ntBASIC14.84□□□□□ -0.03
Shroom1Q5SX79 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Gm5279-201ENSMUST00000199575 745 ntBASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms