Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm6376-201ENSMUST00000209407 580 ntBASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rps4l-201ENSMUST00000071745 943 ntBASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm43347-201ENSMUST00000200226 580 ntBASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 AV026068-213ENSMUST00000223675 1171 ntBASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms