Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Gm45219-201ENSMUST00000205602 465 ntBASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm14350-201ENSMUST00000116642 640 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm18893-201ENSMUST00000198416 943 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm13408-201ENSMUST00000119822 798 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm13935-201ENSMUST00000121859 798 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm42550-201ENSMUST00000201553 960 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm8194-201ENSMUST00000159783 859 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Mospd4-201ENSMUST00000180618 576 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps13aQ5H8C4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Gm38317-201ENSMUST00000195564 343 ntBASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps13aQ5H8C4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps13aQ5H8C4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms