Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Spire1Q52KF3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spire1Q52KF3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Spire1Q52KF3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Spire1Q52KF3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Spire1Q52KF3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.18□□□□□ -0.14
Spire1Q52KF3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.18□□□□□ -0.14
Spire1Q52KF3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Snora78-201ENSMUST00000158630 128 ntBASIC14.18□□□□□ -0.14
Spire1Q52KF3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Gm42550-201ENSMUST00000201553 960 ntBASIC14.18□□□□□ -0.14
Spire1Q52KF3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spire1Q52KF3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.17□□□□□ -0.14
Spire1Q52KF3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Gm12957-201ENSMUST00000117835 377 ntBASIC14.17□□□□□ -0.14
Spire1Q52KF3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Gm24196-201ENSMUST00000179161 110 ntBASIC14.17□□□□□ -0.14
Spire1Q52KF3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Gm18473-201ENSMUST00000220543 868 ntBASIC14.17□□□□□ -0.14
Spire1Q52KF3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.17□□□□□ -0.14
Spire1Q52KF3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spire1Q52KF3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.16□□□□□ -0.14
Spire1Q52KF3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Gm14660-201ENSMUST00000119809 575 ntBASIC14.16□□□□□ -0.14
Spire1Q52KF3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.16□□□□□ -0.14
Spire1Q52KF3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Spire1Q52KF3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spire1Q52KF3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms