Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Gm4899-201ENSMUST00000178708 719 ntBASIC13.12□□□□□ -0.31
Trim40Q3UWA4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim40Q3UWA4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim40Q3UWA4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm7153-201ENSMUST00000117092 455 ntBASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm11452-201ENSMUST00000122376 690 ntBASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm10060-201ENSMUST00000212002 111 ntBASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim40Q3UWA4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.09□□□□□ -0.31
Trim40Q3UWA4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms