Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.45■□□□□ 0.22
Limch1Q3UH68 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.45■□□□□ 0.22
Limch1Q3UH68 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Syt7-205ENSMUST00000224135 1557 ntBASIC16.45■□□□□ 0.22
Limch1Q3UH68 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Limch1Q3UH68 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Gm6222-201ENSMUST00000120787 396 ntBASIC16.44■□□□□ 0.22
Limch1Q3UH68 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Gm44855-201ENSMUST00000205725 362 ntBASIC16.44■□□□□ 0.22
Limch1Q3UH68 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.44■□□□□ 0.22
Limch1Q3UH68 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Limch1Q3UH68 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Gm5566-201ENSMUST00000116118 459 ntBASIC16.43■□□□□ 0.22
Limch1Q3UH68 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Gm9719-201ENSMUST00000162765 543 ntBASIC16.43■□□□□ 0.22
Limch1Q3UH68 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 AA619741-201ENSMUST00000195095 646 ntBASIC16.43■□□□□ 0.22
Limch1Q3UH68 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.43■□□□□ 0.22
Limch1Q3UH68 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.43■□□□□ 0.22
Limch1Q3UH68 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.43■□□□□ 0.22
Limch1Q3UH68 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Limch1Q3UH68 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.42■□□□□ 0.22
Limch1Q3UH68 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.42■□□□□ 0.22
Limch1Q3UH68 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.42■□□□□ 0.22
Limch1Q3UH68 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms