Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm10434-201ENSMUST00000101158 471 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm11628-201ENSMUST00000117568 171 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm14130-201ENSMUST00000118417 987 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm11637-201ENSMUST00000120601 592 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm13570-201ENSMUST00000140763 309 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm37042-201ENSMUST00000193816 581 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm31256-201ENSMUST00000194705 506 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm43378-201ENSMUST00000199336 582 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm19163-201ENSMUST00000223313 780 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 AC126253.1-202ENSMUST00000226732 835 ntBASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vars2Q3U2A8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm11331-201ENSMUST00000119764 288 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm16479-201ENSMUST00000121706 932 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm25732-201ENSMUST00000175168 60 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm44069-201ENSMUST00000204898 506 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vars2Q3U2A8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Gm12363-201ENSMUST00000122250 668 ntBASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Gm13316-201ENSMUST00000140537 691 ntBASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vars2Q3U2A8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms