Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccbe1Q3MI99 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Gm18622-201ENSMUST00000219361 595 ntBASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccbe1Q3MI99 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccbe1Q3MI99 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms