Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm26361-201ENSMUST00000158868 186 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm25072-201ENSMUST00000175233 235 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm8492-201ENSMUST00000182375 987 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm44262-201ENSMUST00000204969 372 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Gm12165-201ENSMUST00000117047 342 ntBASIC12.35□□□□□ -0.43
Chd8Q09XV5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Chd8Q09XV5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Gm44405-201ENSMUST00000198952 126 ntBASIC12.35□□□□□ -0.43
Chd8Q09XV5 Gm24447-201ENSMUST00000083977 338 ntBASIC12.35□□□□□ -0.43
Chd8Q09XV5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.35□□□□□ -0.43
Chd8Q09XV5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chd8Q09XV5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd8Q09XV5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.34□□□□□ -0.43
Chd8Q09XV5 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.34□□□□□ -0.43
Chd8Q09XV5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Gm13996-201ENSMUST00000118456 430 ntBASIC12.34□□□□□ -0.43
Chd8Q09XV5 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.34□□□□□ -0.43
Chd8Q09XV5 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.34□□□□□ -0.43
Chd8Q09XV5 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd8Q09XV5 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.34□□□□□ -0.43
Chd8Q09XV5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.34□□□□□ -0.43
Chd8Q09XV5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 App-207ENSMUST00000227737 2827 ntBASIC12.34□□□□□ -0.43
Chd8Q09XV5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms