Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm14277-201ENSMUST00000121195 360 ntBASIC10.03□□□□□ -0.8
Hspg2Q05793 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.03□□□□□ -0.8
Hspg2Q05793 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Hspg2Q05793 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Hspg2Q05793 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.03□□□□□ -0.8
Hspg2Q05793 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Hspg2Q05793 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.03□□□□□ -0.8
Hspg2Q05793 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Hspg2Q05793 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.03□□□□□ -0.8
Hspg2Q05793 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.03□□□□□ -0.8
Hspg2Q05793 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hspg2Q05793 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Gm13570-201ENSMUST00000140763 309 ntBASIC10.03□□□□□ -0.8
Hspg2Q05793 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Hspg2Q05793 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Hspg2Q05793 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.02□□□□□ -0.8
Hspg2Q05793 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.02□□□□□ -0.8
Hspg2Q05793 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Hspg2Q05793 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Hspg2Q05793 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.02□□□□□ -0.8
Hspg2Q05793 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hspg2Q05793 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Hspg2Q05793 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.02□□□□□ -0.81
Hspg2Q05793 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Gm3890-201ENSMUST00000182416 207 ntBASIC10.02□□□□□ -0.81
Hspg2Q05793 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.02□□□□□ -0.81
Hspg2Q05793 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Gm37835-201ENSMUST00000193305 361 ntBASIC10.02□□□□□ -0.81
Hspg2Q05793 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.02□□□□□ -0.81
Hspg2Q05793 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Gm2260-201ENSMUST00000184965 657 ntBASIC10.02□□□□□ -0.81
Hspg2Q05793 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hspg2Q05793 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Hspg2Q05793 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Hspg2Q05793 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hspg2Q05793 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hspg2Q05793 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Hspg2Q05793 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hspg2Q05793 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hspg2Q05793 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hspg2Q05793 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms