Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.24□□□□□ -0.13
Thumpd3P97770 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Thumpd3P97770 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.24□□□□□ -0.13
Thumpd3P97770 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Gm16026-204ENSMUST00000162652 683 ntBASIC14.24□□□□□ -0.13
Thumpd3P97770 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.24□□□□□ -0.13
Thumpd3P97770 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.24□□□□□ -0.13
Thumpd3P97770 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Thumpd3P97770 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.24□□□□□ -0.13
Thumpd3P97770 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.24□□□□□ -0.13
Thumpd3P97770 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.23□□□□□ -0.13
Thumpd3P97770 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Thumpd3P97770 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Thumpd3P97770 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.23□□□□□ -0.13
Thumpd3P97770 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Gm14057-201ENSMUST00000120631 482 ntBASIC14.23□□□□□ -0.13
Thumpd3P97770 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 AA543401-201ENSMUST00000164248 1269 ntBASIC14.23□□□□□ -0.13
Thumpd3P97770 Gm18057-201ENSMUST00000208220 503 ntBASIC14.23□□□□□ -0.13
Thumpd3P97770 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.23□□□□□ -0.13
Thumpd3P97770 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.23□□□□□ -0.13
Thumpd3P97770 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.23□□□□□ -0.13
Thumpd3P97770 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd3P97770 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.22□□□□□ -0.13
Thumpd3P97770 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm8584-201ENSMUST00000171982 758 ntBASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm25948-201ENSMUST00000175334 112 ntBASIC14.22□□□□□ -0.13
Thumpd3P97770 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm7063-201ENSMUST00000186840 981 ntBASIC14.22□□□□□ -0.13
Thumpd3P97770 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Thumpd3P97770 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.22□□□□□ -0.13
Thumpd3P97770 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thumpd3P97770 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms