Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcc1P97496 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarcc1P97496 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Smarcc1P97496 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Smarcc1P97496 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smarcc1P97496 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Gm12203-201ENSMUST00000118235 598 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 Gm12209-201ENSMUST00000120089 596 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.39■□□□□ 0.37
Smarcc1P97496 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Gm7584-201ENSMUST00000175829 940 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 Gm38266-201ENSMUST00000194931 421 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Gm45930-201ENSMUST00000221330 292 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Smarcc1P97496 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smarcc1P97496 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.39■□□□□ 0.37
Smarcc1P97496 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc1P97496 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smarcc1P97496 Gm13350-201ENSMUST00000120519 479 ntBASIC17.38■□□□□ 0.37
Smarcc1P97496 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcc1P97496 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Mir3102-201ENSMUST00000175555 104 ntBASIC17.38■□□□□ 0.37
Smarcc1P97496 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcc1P97496 Gm29741-201ENSMUST00000192667 421 ntBASIC17.38■□□□□ 0.37
Smarcc1P97496 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.38■□□□□ 0.37
Smarcc1P97496 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.38■□□□□ 0.37
Smarcc1P97496 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcc1P97496 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcc1P97496 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smarcc1P97496 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Smarcc1P97496 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc1P97496 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smarcc1P97496 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Mir698-201ENSMUST00000102164 109 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm22018-201ENSMUST00000104357 131 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.37■□□□□ 0.37
Smarcc1P97496 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm27501-201ENSMUST00000183599 107 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm27682-201ENSMUST00000183930 110 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm37008-201ENSMUST00000195712 319 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.37■□□□□ 0.37
Smarcc1P97496 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms