Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.18■□□□□ 0.02
Trim43cP86449 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.18■□□□□ 0.02
Trim43cP86449 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim43cP86449 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim43cP86449 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.17■□□□□ 0.02
Trim43cP86449 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim43cP86449 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim43cP86449 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.17■□□□□ 0.02
Trim43cP86449 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.17■□□□□ 0.02
Trim43cP86449 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim43cP86449 Gm27989-201ENSMUST00000184721 107 ntBASIC15.17■□□□□ 0.02
Trim43cP86449 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim43cP86449 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim43cP86449 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trim43cP86449 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.17■□□□□ 0.02
Trim43cP86449 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trim43cP86449 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim43cP86449 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.17■□□□□ 0.02
Trim43cP86449 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43cP86449 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Trim43cP86449 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim43cP86449 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trim43cP86449 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.16■□□□□ 0.02
Trim43cP86449 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim43cP86449 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim43cP86449 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Gm15487-201ENSMUST00000122373 465 ntBASIC15.16■□□□□ 0.02
Trim43cP86449 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim43cP86449 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43cP86449 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Trim43cP86449 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim43cP86449 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim43cP86449 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Gm15393-201ENSMUST00000120499 219 ntBASIC15.15■□□□□ 0.02
Trim43cP86449 Gm12151-201ENSMUST00000121374 290 ntBASIC15.15■□□□□ 0.02
Trim43cP86449 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.15■□□□□ 0.02
Trim43cP86449 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim43cP86449 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.15■□□□□ 0.02
Trim43cP86449 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.15■□□□□ 0.02
Trim43cP86449 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trim43cP86449 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim43cP86449 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim43cP86449 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim43cP86449 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim43cP86449 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43cP86449 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms