Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx1P63006 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx1P63006 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx1P63006 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Lhx1P63006 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Lhx1P63006 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx1P63006 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.71□□□□□ -0.21
Lhx1P63006 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx1P63006 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx1P63006 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx1P63006 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.71□□□□□ -0.22
Lhx1P63006 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx1P63006 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.71□□□□□ -0.22
Lhx1P63006 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx1P63006 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Lhx1P63006 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx1P63006 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Lhx1P63006 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.7□□□□□ -0.22
Lhx1P63006 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lhx1P63006 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.7□□□□□ -0.22
Lhx1P63006 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.7□□□□□ -0.22
Lhx1P63006 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Mir6392-201ENSMUST00000184924 108 ntBASIC13.7□□□□□ -0.22
Lhx1P63006 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.7□□□□□ -0.22
Lhx1P63006 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.7□□□□□ -0.22
Lhx1P63006 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.7□□□□□ -0.22
Lhx1P63006 Gm45668-201ENSMUST00000211271 493 ntBASIC13.7□□□□□ -0.22
Lhx1P63006 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.7□□□□□ -0.22
Lhx1P63006 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.7□□□□□ -0.22
Lhx1P63006 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.7□□□□□ -0.22
Lhx1P63006 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lhx1P63006 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lhx1P63006 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx1P63006 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.69□□□□□ -0.22
Lhx1P63006 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lhx1P63006 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
Lhx1P63006 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.69□□□□□ -0.22
Lhx1P63006 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lhx1P63006 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lhx1P63006 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.69□□□□□ -0.22
Lhx1P63006 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lhx1P63006 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lhx1P63006 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.69□□□□□ -0.22
Lhx1P63006 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.69□□□□□ -0.22
Lhx1P63006 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lhx1P63006 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx1P63006 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lhx1P63006 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.68□□□□□ -0.22
Lhx1P63006 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx1P63006 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms