Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vbp1P61759 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.65□□□□□ -0.38
Vbp1P61759 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Vbp1P61759 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.65□□□□□ -0.38
Vbp1P61759 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Vbp1P61759 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.65□□□□□ -0.38
Vbp1P61759 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Vbp1P61759 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vbp1P61759 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Vbp1P61759 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vbp1P61759 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Vbp1P61759 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vbp1P61759 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vbp1P61759 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.64□□□□□ -0.39
Vbp1P61759 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vbp1P61759 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vbp1P61759 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vbp1P61759 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.64□□□□□ -0.39
Vbp1P61759 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.64□□□□□ -0.39
Vbp1P61759 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vbp1P61759 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vbp1P61759 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vbp1P61759 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Vbp1P61759 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Vbp1P61759 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.64□□□□□ -0.39
Vbp1P61759 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.64□□□□□ -0.39
Vbp1P61759 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.64□□□□□ -0.39
Vbp1P61759 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.64□□□□□ -0.39
Vbp1P61759 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.64□□□□□ -0.39
Vbp1P61759 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.64□□□□□ -0.39
Vbp1P61759 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vbp1P61759 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vbp1P61759 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vbp1P61759 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.64□□□□□ -0.39
Vbp1P61759 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vbp1P61759 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.63□□□□□ -0.39
Vbp1P61759 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vbp1P61759 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.63□□□□□ -0.39
Vbp1P61759 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vbp1P61759 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.63□□□□□ -0.39
Vbp1P61759 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.63□□□□□ -0.39
Vbp1P61759 Gm29518-201ENSMUST00000190858 372 ntBASIC12.63□□□□□ -0.39
Vbp1P61759 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.63□□□□□ -0.39
Vbp1P61759 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vbp1P61759 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms