Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.59■□□□□ 0.25
Irf5P56477 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Irf5P56477 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf5P56477 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Irf5P56477 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Irf5P56477 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Irf5P56477 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Irf5P56477 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Gm11918-201ENSMUST00000121660 179 ntBASIC16.58■□□□□ 0.24
Irf5P56477 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC16.58■□□□□ 0.24
Irf5P56477 Gm43630-201ENSMUST00000201550 776 ntBASIC16.58■□□□□ 0.24
Irf5P56477 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Irf5P56477 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.58■□□□□ 0.24
Irf5P56477 Thoc7-209ENSMUST00000225325 765 ntBASIC16.58■□□□□ 0.24
Irf5P56477 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Irf5P56477 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Irf5P56477 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.58■□□□□ 0.24
Irf5P56477 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Irf5P56477 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Irf5P56477 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.58■□□□□ 0.24
Irf5P56477 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Gm43061-201ENSMUST00000198850 2241 ntBASIC16.58■□□□□ 0.24
Irf5P56477 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.58■□□□□ 0.24
Irf5P56477 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Irf5P56477 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf5P56477 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Irf5P56477 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Irf5P56477 Mbnl2-204ENSMUST00000227012 2390 ntBASIC16.57■□□□□ 0.24
Irf5P56477 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.57■□□□□ 0.24
Irf5P56477 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.57■□□□□ 0.24
Irf5P56477 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.57■□□□□ 0.24
Irf5P56477 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Irf5P56477 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Irf5P56477 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.57■□□□□ 0.24
Irf5P56477 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Irf5P56477 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Irf5P56477 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Gm42748-201ENSMUST00000199354 2341 ntBASIC16.57■□□□□ 0.24
Irf5P56477 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Irf5P56477 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Irf5P56477 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Irf5P56477 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf5P56477 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC16.56■□□□□ 0.24
Irf5P56477 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf5P56477 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Irf5P56477 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf5P56477 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf5P56477 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf5P56477 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Irf5P56477 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.56■□□□□ 0.24
Irf5P56477 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf5P56477 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf5P56477 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Irf5P56477 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.56■□□□□ 0.24
Irf5P56477 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.56■□□□□ 0.24
Irf5P56477 Gm15806-201ENSMUST00000120696 955 ntBASIC16.56■□□□□ 0.24
Irf5P56477 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.56■□□□□ 0.24
Irf5P56477 Gm28760-201ENSMUST00000185995 736 ntBASIC16.56■□□□□ 0.24
Irf5P56477 Gm10766-202ENSMUST00000194123 606 ntBASIC16.56■□□□□ 0.24
Irf5P56477 Gm6991-201ENSMUST00000218475 1178 ntBASIC16.56■□□□□ 0.24
Irf5P56477 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.56■□□□□ 0.24
Irf5P56477 Gm9797-201ENSMUST00000052902 613 ntBASIC16.56■□□□□ 0.24
Irf5P56477 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf5P56477 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf5P56477 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms