Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.38□□□□□ -0.27
Cdkn2bP55271 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Gm6222-201ENSMUST00000120787 396 ntBASIC13.37□□□□□ -0.27
Cdkn2bP55271 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.37□□□□□ -0.27
Cdkn2bP55271 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.37□□□□□ -0.27
Cdkn2bP55271 Gm38225-201ENSMUST00000194001 393 ntBASIC13.37□□□□□ -0.27
Cdkn2bP55271 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.37□□□□□ -0.27
Cdkn2bP55271 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.37□□□□□ -0.27
Cdkn2bP55271 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.37□□□□□ -0.27
Cdkn2bP55271 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn2bP55271 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.37□□□□□ -0.27
Cdkn2bP55271 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.36□□□□□ -0.27
Cdkn2bP55271 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn2bP55271 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Gm17271-201ENSMUST00000165535 355 ntBASIC13.35□□□□□ -0.27
Cdkn2bP55271 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Gm29741-201ENSMUST00000192667 421 ntBASIC13.35□□□□□ -0.27
Cdkn2bP55271 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.35□□□□□ -0.27
Cdkn2bP55271 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn2bP55271 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms