Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Ercc3P49135 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Ercc3P49135 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.59■□□□□ 0.25
Ercc3P49135 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Gm8584-201ENSMUST00000171982 758 ntBASIC16.59■□□□□ 0.25
Ercc3P49135 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ercc3P49135 Gm9522-201ENSMUST00000182394 926 ntBASIC16.59■□□□□ 0.25
Ercc3P49135 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.59■□□□□ 0.25
Ercc3P49135 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.59■□□□□ 0.25
Ercc3P49135 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.59■□□□□ 0.25
Ercc3P49135 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.59■□□□□ 0.25
Ercc3P49135 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.59■□□□□ 0.25
Ercc3P49135 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.59■□□□□ 0.25
Ercc3P49135 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.59■□□□□ 0.25
Ercc3P49135 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ercc3P49135 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ercc3P49135 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Ercc3P49135 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ercc3P49135 Gm16215-201ENSMUST00000161990 637 ntBASIC16.58■□□□□ 0.24
Ercc3P49135 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 Gm3436-201ENSMUST00000179930 840 ntBASIC16.58■□□□□ 0.24
Ercc3P49135 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.58■□□□□ 0.24
Ercc3P49135 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.58■□□□□ 0.24
Ercc3P49135 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.58■□□□□ 0.24
Ercc3P49135 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Ercc3P49135 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.58■□□□□ 0.24
Ercc3P49135 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc3P49135 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Ercc3P49135 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Ercc3P49135 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.58■□□□□ 0.24
Ercc3P49135 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Ercc3P49135 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ercc3P49135 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.57■□□□□ 0.24
Ercc3P49135 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ercc3P49135 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Syt7-204ENSMUST00000223586 1344 ntBASIC16.57■□□□□ 0.24
Ercc3P49135 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Mir7684-201ENSMUST00000183858 60 ntBASIC16.57■□□□□ 0.24
Ercc3P49135 Gm37714-201ENSMUST00000194742 342 ntBASIC16.57■□□□□ 0.24
Ercc3P49135 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.57■□□□□ 0.24
Ercc3P49135 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ercc3P49135 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ercc3P49135 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ercc3P49135 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Ercc3P49135 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc3P49135 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ercc3P49135 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ercc3P49135 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ercc3P49135 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc3P49135 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.56■□□□□ 0.24
Ercc3P49135 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc3P49135 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc3P49135 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Ercc3P49135 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Ercc3P49135 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc3P49135 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.56■□□□□ 0.24
Ercc3P49135 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc3P49135 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.56■□□□□ 0.24
Ercc3P49135 Gm15321-201ENSMUST00000121290 288 ntBASIC16.56■□□□□ 0.24
Ercc3P49135 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.56■□□□□ 0.24
Ercc3P49135 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc3P49135 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.56■□□□□ 0.24
Ercc3P49135 Gm44855-201ENSMUST00000205725 362 ntBASIC16.56■□□□□ 0.24
Ercc3P49135 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.56■□□□□ 0.24
Ercc3P49135 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms