Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.63□□□□□ -0.39
Rfx3P48381 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rfx3P48381 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rfx3P48381 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Rfx3P48381 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Rfx3P48381 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Rfx3P48381 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.62□□□□□ -0.39
Rfx3P48381 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rfx3P48381 Gm2810-201ENSMUST00000118681 990 ntBASIC12.62□□□□□ -0.39
Rfx3P48381 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.62□□□□□ -0.39
Rfx3P48381 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.62□□□□□ -0.39
Rfx3P48381 Gm27702-201ENSMUST00000184512 56 ntBASIC12.62□□□□□ -0.39
Rfx3P48381 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.62□□□□□ -0.39
Rfx3P48381 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.62□□□□□ -0.39
Rfx3P48381 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Rfx3P48381 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfx3P48381 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rfx3P48381 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rfx3P48381 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfx3P48381 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfx3P48381 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rfx3P48381 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfx3P48381 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Rfx3P48381 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.61□□□□□ -0.39
Rfx3P48381 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rfx3P48381 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rfx3P48381 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfx3P48381 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Gm24513-201ENSMUST00000174964 138 ntBASIC12.61□□□□□ -0.39
Rfx3P48381 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rfx3P48381 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Gm27494-201ENSMUST00000184735 189 ntBASIC12.61□□□□□ -0.39
Rfx3P48381 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfx3P48381 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.61□□□□□ -0.39
Rfx3P48381 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.61□□□□□ -0.39
Rfx3P48381 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.61□□□□□ -0.39
Rfx3P48381 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.61□□□□□ -0.39
Rfx3P48381 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rfx3P48381 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.61□□□□□ -0.39
Rfx3P48381 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfx3P48381 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms