Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HttP42859 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HttP42859 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HttP42859 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.51□□□□□ -0.09
HttP42859 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HttP42859 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.51□□□□□ -0.09
HttP42859 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HttP42859 Gm5950-201ENSMUST00000213337 772 ntBASIC14.51□□□□□ -0.09
HttP42859 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.51□□□□□ -0.09
HttP42859 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.51□□□□□ -0.09
HttP42859 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Gm12029-201ENSMUST00000120073 832 ntBASIC14.51□□□□□ -0.09
HttP42859 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.51□□□□□ -0.09
HttP42859 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.51□□□□□ -0.09
HttP42859 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.51□□□□□ -0.09
HttP42859 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.51□□□□□ -0.09
HttP42859 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HttP42859 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.5□□□□□ -0.09
HttP42859 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.5□□□□□ -0.09
HttP42859 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HttP42859 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.5□□□□□ -0.09
HttP42859 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.5□□□□□ -0.09
HttP42859 Gm11675-201ENSMUST00000121873 832 ntBASIC14.5□□□□□ -0.09
HttP42859 Gm31256-201ENSMUST00000194705 506 ntBASIC14.5□□□□□ -0.09
HttP42859 Gm8712-201ENSMUST00000221090 701 ntBASIC14.5□□□□□ -0.09
HttP42859 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HttP42859 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HttP42859 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.5□□□□□ -0.09
HttP42859 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HttP42859 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HttP42859 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.5□□□□□ -0.09
HttP42859 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
HttP42859 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HttP42859 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HttP42859 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.49□□□□□ -0.09
HttP42859 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.49□□□□□ -0.09
HttP42859 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HttP42859 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HttP42859 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HttP42859 Gm44262-201ENSMUST00000204969 372 ntBASIC14.49□□□□□ -0.09
HttP42859 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.49□□□□□ -0.09
HttP42859 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HttP42859 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HttP42859 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HttP42859 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HttP42859 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HttP42859 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HttP42859 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms