Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chd1P40201 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC20.53■□□□□ 0.88
Chd1P40201 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC20.53■□□□□ 0.88
Chd1P40201 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC20.53■□□□□ 0.88
Chd1P40201 Spcs1-203ENSMUST00000226374 592 ntBASIC20.53■□□□□ 0.88
Chd1P40201 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chd1P40201 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 Gm12020-201ENSMUST00000119030 2042 ntBASIC20.53■□□□□ 0.88
Chd1P40201 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Chd1P40201 Gm37827-201ENSMUST00000194486 1542 ntBASIC20.53■□□□□ 0.88
Chd1P40201 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC20.53■□□□□ 0.88
Chd1P40201 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC20.53■□□□□ 0.88
Chd1P40201 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chd1P40201 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chd1P40201 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC20.53■□□□□ 0.88
Chd1P40201 Gm10752-201ENSMUST00000218348 729 ntBASIC20.53■□□□□ 0.88
Chd1P40201 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chd1P40201 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1P40201 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1P40201 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC20.52■□□□□ 0.88
Chd1P40201 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1P40201 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC20.52■□□□□ 0.88
Chd1P40201 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1P40201 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1P40201 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Chd1P40201 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC20.52■□□□□ 0.88
Chd1P40201 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1P40201 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1P40201 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC20.52■□□□□ 0.88
Chd1P40201 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1P40201 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chd1P40201 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1P40201 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1P40201 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1P40201 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1P40201 Gm11930-201ENSMUST00000117788 190 ntBASIC20.51■□□□□ 0.87
Chd1P40201 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC20.51■□□□□ 0.87
Chd1P40201 Gm8365-201ENSMUST00000197334 648 ntBASIC20.51■□□□□ 0.87
Chd1P40201 Gm7848-201ENSMUST00000210739 718 ntBASIC20.51■□□□□ 0.87
Chd1P40201 Gm7207-201ENSMUST00000211575 1067 ntBASIC20.51■□□□□ 0.87
Chd1P40201 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Chd1P40201 Ntng1-201ENSMUST00000051253 327 ntBASIC20.51■□□□□ 0.87
Chd1P40201 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC20.51■□□□□ 0.87
Chd1P40201 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1P40201 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1P40201 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1P40201 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1P40201 Gm12286-201ENSMUST00000119246 1002 ntBASIC20.5■□□□□ 0.87
Chd1P40201 Gm12502-201ENSMUST00000120197 444 ntBASIC20.5■□□□□ 0.87
Chd1P40201 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC20.5■□□□□ 0.87
Chd1P40201 Gm44772-201ENSMUST00000207623 1191 ntBASIC20.5■□□□□ 0.87
Chd1P40201 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC20.5■□□□□ 0.87
Chd1P40201 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Gm38102-201ENSMUST00000192791 1935 ntBASIC20.5■□□□□ 0.87
Chd1P40201 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chd1P40201 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Chd1P40201 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Chd1P40201 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC20.5■□□□□ 0.87
Chd1P40201 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Chd1P40201 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Gm45691-201ENSMUST00000206905 1120 ntBASIC20.5■□□□□ 0.87
Chd1P40201 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC20.5■□□□□ 0.87
Chd1P40201 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1P40201 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1P40201 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC20.49■□□□□ 0.87
Chd1P40201 Gm3287-205ENSMUST00000228893 1332 ntBASIC20.49■□□□□ 0.87
Chd1P40201 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1P40201 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Chd1P40201 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC20.49■□□□□ 0.87
Chd1P40201 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Chd1P40201 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Chd1P40201 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Chd1P40201 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC20.49■□□□□ 0.87
Chd1P40201 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Chd1P40201 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC20.49■□□□□ 0.87
Chd1P40201 Gm8712-201ENSMUST00000221090 701 ntBASIC20.49■□□□□ 0.87
Chd1P40201 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC20.49■□□□□ 0.87
Chd1P40201 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1P40201 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1P40201 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1P40201 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Chd1P40201 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms