Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Pde6bP23440 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Pde6bP23440 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.27■□□□□ 0.04
Pde6bP23440 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.27■□□□□ 0.04
Pde6bP23440 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pde6bP23440 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.27■□□□□ 0.04
Pde6bP23440 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Pde6bP23440 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.27■□□□□ 0.03
Pde6bP23440 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.27■□□□□ 0.03
Pde6bP23440 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pde6bP23440 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6bP23440 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pde6bP23440 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.26■□□□□ 0.03
Pde6bP23440 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.26■□□□□ 0.03
Pde6bP23440 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.26■□□□□ 0.03
Pde6bP23440 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.26■□□□□ 0.03
Pde6bP23440 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Gm15806-201ENSMUST00000120696 955 ntBASIC15.26■□□□□ 0.03
Pde6bP23440 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.26■□□□□ 0.03
Pde6bP23440 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pde6bP23440 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pde6bP23440 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pde6bP23440 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.26■□□□□ 0.03
Pde6bP23440 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6bP23440 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pde6bP23440 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Gm9002-201ENSMUST00000178437 499 ntBASIC15.25■□□□□ 0.03
Pde6bP23440 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pde6bP23440 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.25■□□□□ 0.03
Pde6bP23440 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Gm5425-201ENSMUST00000214125 459 ntBASIC15.25■□□□□ 0.03
Pde6bP23440 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.25■□□□□ 0.03
Pde6bP23440 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pde6bP23440 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pde6bP23440 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.25■□□□□ 0.03
Pde6bP23440 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pde6bP23440 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Pde6bP23440 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.25■□□□□ 0.03
Pde6bP23440 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.25■□□□□ 0.03
Pde6bP23440 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6bP23440 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Pde6bP23440 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pde6bP23440 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Pde6bP23440 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.24■□□□□ 0.03
Pde6bP23440 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Pde6bP23440 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.24■□□□□ 0.03
Pde6bP23440 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.24■□□□□ 0.03
Pde6bP23440 Gm15824-201ENSMUST00000119516 955 ntBASIC15.24■□□□□ 0.03
Pde6bP23440 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.24■□□□□ 0.03
Pde6bP23440 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
Pde6bP23440 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms