Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VimP20152 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VimP20152 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
VimP20152 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.16□□□□□ -0.14
VimP20152 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
VimP20152 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VimP20152 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VimP20152 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VimP20152 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.16□□□□□ -0.14
VimP20152 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.16□□□□□ -0.14
VimP20152 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.16□□□□□ -0.14
VimP20152 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
VimP20152 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.16□□□□□ -0.14
VimP20152 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VimP20152 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.15□□□□□ -0.14
VimP20152 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VimP20152 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
VimP20152 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.15□□□□□ -0.14
VimP20152 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Gm15565-201ENSMUST00000118890 427 ntBASIC14.15□□□□□ -0.14
VimP20152 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.15□□□□□ -0.14
VimP20152 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.15□□□□□ -0.14
VimP20152 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.15□□□□□ -0.14
VimP20152 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.15□□□□□ -0.14
VimP20152 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
VimP20152 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.15□□□□□ -0.14
VimP20152 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VimP20152 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
VimP20152 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
VimP20152 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VimP20152 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VimP20152 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.14□□□□□ -0.15
VimP20152 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.14□□□□□ -0.15
VimP20152 Gm25016-201ENSMUST00000158399 131 ntBASIC14.14□□□□□ -0.15
VimP20152 Gm9182-201ENSMUST00000217829 639 ntBASIC14.14□□□□□ -0.15
VimP20152 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.14□□□□□ -0.15
VimP20152 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VimP20152 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VimP20152 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VimP20152 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.14□□□□□ -0.15
VimP20152 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VimP20152 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.14□□□□□ -0.15
VimP20152 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms