Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.23□□□□□ -0.29
ApoeP08226 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.23□□□□□ -0.29
ApoeP08226 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.23□□□□□ -0.29
ApoeP08226 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ApoeP08226 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.23□□□□□ -0.29
ApoeP08226 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ApoeP08226 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.23□□□□□ -0.29
ApoeP08226 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ApoeP08226 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.22□□□□□ -0.29
ApoeP08226 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.22□□□□□ -0.29
ApoeP08226 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ApoeP08226 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.22□□□□□ -0.29
ApoeP08226 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ApoeP08226 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ApoeP08226 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ApoeP08226 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ApoeP08226 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.21□□□□□ -0.29
ApoeP08226 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.21□□□□□ -0.29
ApoeP08226 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
ApoeP08226 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.21□□□□□ -0.29
ApoeP08226 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.21□□□□□ -0.29
ApoeP08226 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ApoeP08226 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.21□□□□□ -0.29
ApoeP08226 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ApoeP08226 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
ApoeP08226 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.21□□□□□ -0.3
ApoeP08226 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ApoeP08226 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ApoeP08226 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms