Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Vti1bO88384 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vti1bO88384 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.34□□□□□ -0.27
Vti1bO88384 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Vti1bO88384 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vti1bO88384 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vti1bO88384 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vti1bO88384 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vti1bO88384 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.33□□□□□ -0.28
Vti1bO88384 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.33□□□□□ -0.28
Vti1bO88384 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vti1bO88384 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.33□□□□□ -0.28
Vti1bO88384 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.33□□□□□ -0.28
Vti1bO88384 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Gm45098-201ENSMUST00000207179 657 ntBASIC13.33□□□□□ -0.28
Vti1bO88384 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.33□□□□□ -0.28
Vti1bO88384 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.33□□□□□ -0.28
Vti1bO88384 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.33□□□□□ -0.28
Vti1bO88384 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vti1bO88384 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1bO88384 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vti1bO88384 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.32□□□□□ -0.28
Vti1bO88384 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vti1bO88384 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vti1bO88384 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.32□□□□□ -0.28
Vti1bO88384 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.32□□□□□ -0.28
Vti1bO88384 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.32□□□□□ -0.28
Vti1bO88384 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Gm18889-201ENSMUST00000174284 929 ntBASIC13.32□□□□□ -0.28
Vti1bO88384 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vti1bO88384 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vti1bO88384 Chchd1-203ENSMUST00000224633 557 ntBASIC13.32□□□□□ -0.28
Vti1bO88384 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Vti1bO88384 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vti1bO88384 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.32□□□□□ -0.28
Vti1bO88384 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1bO88384 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vti1bO88384 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vti1bO88384 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vti1bO88384 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.31□□□□□ -0.28
Vti1bO88384 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.31□□□□□ -0.28
Vti1bO88384 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.31□□□□□ -0.28
Vti1bO88384 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.31□□□□□ -0.28
Vti1bO88384 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.31□□□□□ -0.28
Vti1bO88384 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms