Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.5□□□□□ -0.41
Raet1cO08604 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Raet1cO08604 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
Raet1cO08604 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Raet1cO08604 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Raet1cO08604 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1cO08604 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Raet1cO08604 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.49□□□□□ -0.41
Raet1cO08604 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.49□□□□□ -0.41
Raet1cO08604 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Raet1cO08604 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.49□□□□□ -0.41
Raet1cO08604 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Raet1cO08604 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Raet1cO08604 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Raet1cO08604 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Raet1cO08604 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Raet1cO08604 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1cO08604 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Gm24543-201ENSMUST00000103867 82 ntBASIC12.48□□□□□ -0.41
Raet1cO08604 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.48□□□□□ -0.41
Raet1cO08604 Gm15693-201ENSMUST00000120470 637 ntBASIC12.48□□□□□ -0.41
Raet1cO08604 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Raet1cO08604 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.48□□□□□ -0.41
Raet1cO08604 Gm28630-201ENSMUST00000187806 498 ntBASIC12.48□□□□□ -0.41
Raet1cO08604 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.48□□□□□ -0.41
Raet1cO08604 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Raet1cO08604 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1cO08604 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms