Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm15394-201ENSMUST00000119656 1308 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm13612-201ENSMUST00000119276 390 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm15379-201ENSMUST00000121224 648 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm20482-202ENSMUST00000174729 825 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm20915-201ENSMUST00000191575 663 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm19211-201ENSMUST00000200251 1206 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 AC124729.1-202ENSMUST00000225587 938 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 1700023G09Rik-201ENSMUST00000194513 1460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.29■□□□□ 0.2
Nkx1-1G3UXB3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Gm15103-201ENSMUST00000119893 871 ntBASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Gm6461-201ENSMUST00000120015 633 ntBASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Gm19208-201ENSMUST00000213861 912 ntBASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Gm10608-202ENSMUST00000213924 676 ntBASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Gm3222-201ENSMUST00000071282 990 ntBASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx1-1G3UXB3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm12566-201ENSMUST00000121479 359 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm1335-201ENSMUST00000121653 386 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm12134-201ENSMUST00000122109 520 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm27025-201ENSMUST00000182392 942 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm29396-201ENSMUST00000185659 716 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.27■□□□□ 0.2
Nkx1-1G3UXB3 Gm38158-201ENSMUST00000194617 339 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms