Protein–RNA interactions for Protein: E9Q7P1

Col22a1, Collagen, type XXII, alpha 1, mousemouse

Predictions only

Length 1,613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col22a1E9Q7P1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col22a1E9Q7P1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Gm14109-201ENSMUST00000118814 309 ntBASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Gm9555-201ENSMUST00000200908 583 ntBASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col22a1E9Q7P1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Arhgef33-207ENSMUST00000224966 490 ntBASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col22a1E9Q7P1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm16481-201ENSMUST00000119074 1227 ntBASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm37042-201ENSMUST00000193816 581 ntBASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm17330-201ENSMUST00000221047 165 ntBASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm8365-201ENSMUST00000197334 648 ntBASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Gm44262-201ENSMUST00000204969 372 ntBASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.36■□□□□ 0.37
Col22a1E9Q7P1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Spcs1-203ENSMUST00000226374 592 ntBASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col22a1E9Q7P1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Col22a1E9Q7P1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col22a1E9Q7P1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Col22a1E9Q7P1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col22a1E9Q7P1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col22a1E9Q7P1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col22a1E9Q7P1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col22a1E9Q7P1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms