Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.69■□□□□ 0.26
Ube4aE9Q735 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.69■□□□□ 0.26
Ube4aE9Q735 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Snora78-201ENSMUST00000158630 128 ntBASIC16.69■□□□□ 0.26
Ube4aE9Q735 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Gm45841-201ENSMUST00000207700 164 ntBASIC16.69■□□□□ 0.26
Ube4aE9Q735 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Gm5687-201ENSMUST00000118252 640 ntBASIC16.68■□□□□ 0.26
Ube4aE9Q735 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.68■□□□□ 0.26
Ube4aE9Q735 Gm12134-201ENSMUST00000122109 520 ntBASIC16.68■□□□□ 0.26
Ube4aE9Q735 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.68■□□□□ 0.26
Ube4aE9Q735 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Gm27731-201ENSMUST00000185192 107 ntBASIC16.68■□□□□ 0.26
Ube4aE9Q735 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4aE9Q735 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Gm6152-201ENSMUST00000151704 340 ntBASIC16.67■□□□□ 0.26
Ube4aE9Q735 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.67■□□□□ 0.26
Ube4aE9Q735 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.67■□□□□ 0.26
Ube4aE9Q735 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.67■□□□□ 0.26
Ube4aE9Q735 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.67■□□□□ 0.26
Ube4aE9Q735 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.67■□□□□ 0.26
Ube4aE9Q735 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms