Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm13385-201ENSMUST00000121089 220 ntBASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm8927-201ENSMUST00000181978 981 ntBASIC13.75□□□□□ -0.21
Srp54bE9PXC0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm3222-201ENSMUST00000071282 990 ntBASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Gm15824-201ENSMUST00000119516 955 ntBASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.74□□□□□ -0.21
Srp54bE9PXC0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Srp54bE9PXC0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Gm13829-201ENSMUST00000119600 138 ntBASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.73□□□□□ -0.21
Srp54bE9PXC0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srp54bE9PXC0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Srp54bE9PXC0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms