Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Gm16505-201ENSMUST00000179981 232 ntBASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Nsd1-205ENSMUST00000224693 852 ntBASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Gm44645-201ENSMUST00000205492 1653 ntBASIC19.27■□□□□ 0.67
Hfm1D3Z4R1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hfm1D3Z4R1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hfm1D3Z4R1 Gm44981-201ENSMUST00000205549 1943 ntBASIC19.27■□□□□ 0.67
Hfm1D3Z4R1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Hfm1D3Z4R1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Gm16202-201ENSMUST00000117532 544 ntBASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Gm11222-201ENSMUST00000119005 738 ntBASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Gm5781-201ENSMUST00000219792 443 ntBASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 CT030182.1-201ENSMUST00000225935 533 ntBASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hfm1D3Z4R1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hfm1D3Z4R1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Gm43289-201ENSMUST00000200537 1475 ntBASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms