Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Gm37714-201ENSMUST00000194742 342 ntBASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb1A2AQ07 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Mir449b-201ENSMUST00000104833 80 ntBASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Gm6415-201ENSMUST00000118488 348 ntBASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubb1A2AQ07 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Gm24543-201ENSMUST00000103867 82 ntBASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Gm10253-201ENSMUST00000194270 940 ntBASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Gm5312-201ENSMUST00000203728 547 ntBASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Shd-206ENSMUST00000225145 998 ntBASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Mir497b-201ENSMUST00000093601 125 ntBASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms