Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim13Q9CYB0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.99■□□□□ 0.79
Trim13Q9CYB0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim13Q9CYB0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim13Q9CYB0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim13Q9CYB0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim13Q9CYB0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim13Q9CYB0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim13Q9CYB0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim13Q9CYB0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim13Q9CYB0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim13Q9CYB0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim13Q9CYB0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim13Q9CYB0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim13Q9CYB0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim13Q9CYB0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Trim13Q9CYB0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trim13Q9CYB0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim13Q9CYB0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Trim13Q9CYB0 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.95■□□□□ 0.78
Trim13Q9CYB0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim13Q9CYB0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim13Q9CYB0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim13Q9CYB0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim13Q9CYB0 Gm8503-201ENSMUST00000118131 455 ntBASIC19.95■□□□□ 0.78
Trim13Q9CYB0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim13Q9CYB0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim13Q9CYB0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.95■□□□□ 0.78
Trim13Q9CYB0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.95■□□□□ 0.78
Trim13Q9CYB0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Gm6821-201ENSMUST00000107540 542 ntBASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim13Q9CYB0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim13Q9CYB0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim13Q9CYB0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim13Q9CYB0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim13Q9CYB0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim13Q9CYB0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim13Q9CYB0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim13Q9CYB0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim13Q9CYB0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim13Q9CYB0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim13Q9CYB0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim13Q9CYB0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim13Q9CYB0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim13Q9CYB0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim13Q9CYB0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim13Q9CYB0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim13Q9CYB0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim13Q9CYB0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim13Q9CYB0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim13Q9CYB0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.85■□□□□ 0.77
Trim13Q9CYB0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim13Q9CYB0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trim13Q9CYB0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.85■□□□□ 0.77
Trim13Q9CYB0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms