Protein–RNA interactions for Protein: Q3TS39

1700066B19Rik, RIKEN cDNA 1700066B19 gene, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700066B19RikQ3TS39 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
1700066B19RikQ3TS39 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
1700066B19RikQ3TS39 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
1700066B19RikQ3TS39 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
1700066B19RikQ3TS39 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
1700066B19RikQ3TS39 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
1700066B19RikQ3TS39 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
1700066B19RikQ3TS39 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
1700066B19RikQ3TS39 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
1700066B19RikQ3TS39 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
1700066B19RikQ3TS39 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
1700066B19RikQ3TS39 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
1700066B19RikQ3TS39 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
1700066B19RikQ3TS39 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.28■□□□□ 0.84
1700066B19RikQ3TS39 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
1700066B19RikQ3TS39 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
1700066B19RikQ3TS39 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
1700066B19RikQ3TS39 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
1700066B19RikQ3TS39 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
1700066B19RikQ3TS39 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
1700066B19RikQ3TS39 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.27■□□□□ 0.84
1700066B19RikQ3TS39 Gm7332-201ENSMUST00000118351 454 ntBASIC20.27■□□□□ 0.84
1700066B19RikQ3TS39 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
1700066B19RikQ3TS39 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
1700066B19RikQ3TS39 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
1700066B19RikQ3TS39 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
1700066B19RikQ3TS39 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
1700066B19RikQ3TS39 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
1700066B19RikQ3TS39 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
1700066B19RikQ3TS39 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
1700066B19RikQ3TS39 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Gm12366-201ENSMUST00000121722 873 ntBASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Gm5786-201ENSMUST00000085368 882 ntBASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.24■□□□□ 0.83
1700066B19RikQ3TS39 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
1700066B19RikQ3TS39 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
1700066B19RikQ3TS39 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
1700066B19RikQ3TS39 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
1700066B19RikQ3TS39 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
1700066B19RikQ3TS39 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
1700066B19RikQ3TS39 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
1700066B19RikQ3TS39 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
1700066B19RikQ3TS39 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
1700066B19RikQ3TS39 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
1700066B19RikQ3TS39 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
1700066B19RikQ3TS39 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
1700066B19RikQ3TS39 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
1700066B19RikQ3TS39 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
1700066B19RikQ3TS39 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
1700066B19RikQ3TS39 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
1700066B19RikQ3TS39 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
1700066B19RikQ3TS39 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
1700066B19RikQ3TS39 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
1700066B19RikQ3TS39 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
1700066B19RikQ3TS39 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
1700066B19RikQ3TS39 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
1700066B19RikQ3TS39 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
1700066B19RikQ3TS39 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
1700066B19RikQ3TS39 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
1700066B19RikQ3TS39 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
1700066B19RikQ3TS39 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
1700066B19RikQ3TS39 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
1700066B19RikQ3TS39 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
1700066B19RikQ3TS39 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
1700066B19RikQ3TS39 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
1700066B19RikQ3TS39 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
1700066B19RikQ3TS39 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
1700066B19RikQ3TS39 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
1700066B19RikQ3TS39 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
1700066B19RikQ3TS39 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms