Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm45855-201ENSMUST00000212546 880 ntBASIC17.23■□□□□ 0.35
Rom1P32958 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rom1P32958 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rom1P32958 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Rom1P32958 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.22■□□□□ 0.35
Rom1P32958 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rom1P32958 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rom1P32958 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.21■□□□□ 0.35
Rom1P32958 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Rom1P32958 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rom1P32958 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rom1P32958 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rom1P32958 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rom1P32958 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rom1P32958 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rom1P32958 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.21■□□□□ 0.35
Rom1P32958 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rom1P32958 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rom1P32958 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rom1P32958 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rom1P32958 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rom1P32958 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Rom1P32958 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.2■□□□□ 0.34
Rom1P32958 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rom1P32958 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.2■□□□□ 0.34
Rom1P32958 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rom1P32958 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rom1P32958 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Rom1P32958 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rom1P32958 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.19■□□□□ 0.34
Rom1P32958 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rom1P32958 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Rom1P32958 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rom1P32958 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rom1P32958 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rom1P32958 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rom1P32958 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rom1P32958 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rom1P32958 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rom1P32958 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Rom1P32958 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rom1P32958 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rom1P32958 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rom1P32958 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rom1P32958 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rom1P32958 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rom1P32958 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rom1P32958 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rom1P32958 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rom1P32958 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Rom1P32958 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rom1P32958 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rom1P32958 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rom1P32958 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rom1P32958 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rom1P32958 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rom1P32958 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.16■□□□□ 0.34
Rom1P32958 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rom1P32958 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.16■□□□□ 0.34
Rom1P32958 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Rom1P32958 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rom1P32958 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.15■□□□□ 0.34
Rom1P32958 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rom1P32958 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.15■□□□□ 0.34
Rom1P32958 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rom1P32958 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rom1P32958 Nkain2-201ENSMUST00000092602 558 ntBASIC17.14■□□□□ 0.33
Rom1P32958 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rom1P32958 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rom1P32958 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rom1P32958 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rom1P32958 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rom1P32958 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rom1P32958 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rom1P32958 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rom1P32958 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rom1P32958 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rom1P32958 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rom1P32958 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.12■□□□□ 0.33
Rom1P32958 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.12■□□□□ 0.33
Rom1P32958 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rom1P32958 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Rom1P32958 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rom1P32958 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rom1P32958 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rom1P32958 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rom1P32958 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rom1P32958 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rom1P32958 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rom1P32958 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rom1P32958 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rom1P32958 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rom1P32958 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rom1P32958 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rom1P32958 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rom1P32958 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rom1P32958 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rom1P32958 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rom1P32958 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rom1P32958 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms