Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC31.19■■■□□ 2.58
Tubgcp6G5E8P0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Tubgcp6G5E8P0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Tubgcp6G5E8P0 Gm16464-201ENSMUST00000117815 1095 ntBASIC31.18■■■□□ 2.58
Tubgcp6G5E8P0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Tubgcp6G5E8P0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC31.18■■■□□ 2.58
Tubgcp6G5E8P0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Tubgcp6G5E8P0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Tubgcp6G5E8P0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Tubgcp6G5E8P0 Gm12922-201ENSMUST00000120626 809 ntBASIC31.17■■■□□ 2.58
Tubgcp6G5E8P0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC31.17■■■□□ 2.58
Tubgcp6G5E8P0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Tubgcp6G5E8P0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Tubgcp6G5E8P0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tubgcp6G5E8P0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Tubgcp6G5E8P0 Gm45417-201ENSMUST00000209533 758 ntBASIC31.15■■■□□ 2.58
Tubgcp6G5E8P0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Tubgcp6G5E8P0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC31.14■■■□□ 2.58
Tubgcp6G5E8P0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Tubgcp6G5E8P0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC31.12■■■□□ 2.57
Tubgcp6G5E8P0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC31.12■■■□□ 2.57
Tubgcp6G5E8P0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Tubgcp6G5E8P0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Tubgcp6G5E8P0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Tubgcp6G5E8P0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Tubgcp6G5E8P0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Tubgcp6G5E8P0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Tubgcp6G5E8P0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Tubgcp6G5E8P0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Tubgcp6G5E8P0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Tubgcp6G5E8P0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Tubgcp6G5E8P0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Tubgcp6G5E8P0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC31.08■■■□□ 2.57
Tubgcp6G5E8P0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC31.08■■■□□ 2.57
Tubgcp6G5E8P0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Tubgcp6G5E8P0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Tubgcp6G5E8P0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Tubgcp6G5E8P0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Tubgcp6G5E8P0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Tubgcp6G5E8P0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tubgcp6G5E8P0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tubgcp6G5E8P0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tubgcp6G5E8P0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Tubgcp6G5E8P0 AC140930.3-201ENSMUST00000222935 274 ntBASIC31.06■■■□□ 2.56
Tubgcp6G5E8P0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tubgcp6G5E8P0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Tubgcp6G5E8P0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Tubgcp6G5E8P0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Tubgcp6G5E8P0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Tubgcp6G5E8P0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC31.04■■■□□ 2.56
Tubgcp6G5E8P0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Tubgcp6G5E8P0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tubgcp6G5E8P0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Tubgcp6G5E8P0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Tubgcp6G5E8P0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Tubgcp6G5E8P0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC31.02■■■□□ 2.56
Tubgcp6G5E8P0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Tubgcp6G5E8P0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Tubgcp6G5E8P0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Tubgcp6G5E8P0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC31.01■■■□□ 2.55
Tubgcp6G5E8P0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Tubgcp6G5E8P0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC31.01■■■□□ 2.55
Tubgcp6G5E8P0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC31.01■■■□□ 2.55
Tubgcp6G5E8P0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Tubgcp6G5E8P0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Tubgcp6G5E8P0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Tubgcp6G5E8P0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC31■■■□□ 2.55
Tubgcp6G5E8P0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC31■■■□□ 2.55
Tubgcp6G5E8P0 Gm12821-201ENSMUST00000120022 600 ntBASIC30.99■■■□□ 2.55
Tubgcp6G5E8P0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC30.99■■■□□ 2.55
Tubgcp6G5E8P0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Tubgcp6G5E8P0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Tubgcp6G5E8P0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Tubgcp6G5E8P0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
Tubgcp6G5E8P0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Tubgcp6G5E8P0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Tubgcp6G5E8P0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Tubgcp6G5E8P0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC30.97■■■□□ 2.55
Tubgcp6G5E8P0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Tubgcp6G5E8P0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Tubgcp6G5E8P0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC30.96■■■□□ 2.55
Tubgcp6G5E8P0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC30.96■■■□□ 2.55
Tubgcp6G5E8P0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tubgcp6G5E8P0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tubgcp6G5E8P0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tubgcp6G5E8P0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
Tubgcp6G5E8P0 Gm40881-201ENSMUST00000223397 166 ntBASIC30.95■■■□□ 2.55
Tubgcp6G5E8P0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Tubgcp6G5E8P0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Tubgcp6G5E8P0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Tubgcp6G5E8P0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC30.94■■■□□ 2.54
Tubgcp6G5E8P0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Tubgcp6G5E8P0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC30.94■■■□□ 2.54
Tubgcp6G5E8P0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Tubgcp6G5E8P0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Tubgcp6G5E8P0 Gm42699-201ENSMUST00000198104 1657 ntBASIC30.94■■■□□ 2.54
Tubgcp6G5E8P0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
Tubgcp6G5E8P0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Tubgcp6G5E8P0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC30.93■■■□□ 2.54
Tubgcp6G5E8P0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC30.92■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms