Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav6-5A0A075B6B5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-5A0A075B6B5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-5A0A075B6B5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-5A0A075B6B5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-5A0A075B6B5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-5A0A075B6B5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-5A0A075B6B5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-5A0A075B6B5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trav6-5A0A075B6B5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-5A0A075B6B5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.85■□□□□ 0.29
Trav6-5A0A075B6B5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-5A0A075B6B5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav6-5A0A075B6B5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.85■□□□□ 0.29
Trav6-5A0A075B6B5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-5A0A075B6B5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav6-5A0A075B6B5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-5A0A075B6B5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-5A0A075B6B5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-5A0A075B6B5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-5A0A075B6B5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav6-5A0A075B6B5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-5A0A075B6B5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.84■□□□□ 0.29
Trav6-5A0A075B6B5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-5A0A075B6B5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav6-5A0A075B6B5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav6-5A0A075B6B5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-5A0A075B6B5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav6-5A0A075B6B5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Trav6-5A0A075B6B5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-5A0A075B6B5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-5A0A075B6B5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-5A0A075B6B5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-5A0A075B6B5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav6-5A0A075B6B5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-5A0A075B6B5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-5A0A075B6B5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-5A0A075B6B5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav6-5A0A075B6B5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-5A0A075B6B5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-5A0A075B6B5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.82■□□□□ 0.28
Trav6-5A0A075B6B5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-5A0A075B6B5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav6-5A0A075B6B5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-5A0A075B6B5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-5A0A075B6B5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav6-5A0A075B6B5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-5A0A075B6B5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-5A0A075B6B5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-5A0A075B6B5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-5A0A075B6B5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-5A0A075B6B5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-5A0A075B6B5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav6-5A0A075B6B5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-5A0A075B6B5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-5A0A075B6B5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-5A0A075B6B5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-5A0A075B6B5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Trav6-5A0A075B6B5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trav6-5A0A075B6B5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-5A0A075B6B5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-5A0A075B6B5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav6-5A0A075B6B5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-5A0A075B6B5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-5A0A075B6B5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-5A0A075B6B5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-5A0A075B6B5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav6-5A0A075B6B5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav6-5A0A075B6B5 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.76■□□□□ 0.27
Trav6-5A0A075B6B5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Trav6-5A0A075B6B5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-5A0A075B6B5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-5A0A075B6B5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-5A0A075B6B5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-5A0A075B6B5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-5A0A075B6B5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-5A0A075B6B5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav6-5A0A075B6B5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-5A0A075B6B5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms