Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.42□□□□□ -0.26
Ccdc166S4R181 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gm8602-201ENSMUST00000184045 607 ntBASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.42□□□□□ -0.26
Ccdc166S4R181 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gm18062-201ENSMUST00000208020 547 ntBASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gm18055-201ENSMUST00000208254 547 ntBASIC13.42□□□□□ -0.26
Ccdc166S4R181 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gm9908-201ENSMUST00000211534 448 ntBASIC13.42□□□□□ -0.26
Ccdc166S4R181 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.42□□□□□ -0.26
Ccdc166S4R181 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.42□□□□□ -0.26
Ccdc166S4R181 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc166S4R181 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.41□□□□□ -0.26
Ccdc166S4R181 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Gm37714-201ENSMUST00000194742 342 ntBASIC13.41□□□□□ -0.26
Ccdc166S4R181 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Gm5425-201ENSMUST00000214125 459 ntBASIC13.41□□□□□ -0.26
Ccdc166S4R181 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Gm9797-201ENSMUST00000052902 613 ntBASIC13.41□□□□□ -0.26
Ccdc166S4R181 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.41□□□□□ -0.26
Ccdc166S4R181 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc166S4R181 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc166S4R181 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Gm42612-201ENSMUST00000197986 623 ntBASIC13.4□□□□□ -0.26
Ccdc166S4R181 Gm43170-201ENSMUST00000199827 612 ntBASIC13.4□□□□□ -0.26
Ccdc166S4R181 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc166S4R181 Gm15823-201ENSMUST00000064305 670 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms