Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Gm46209-201ENSMUST00000217912 553 ntBASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clcf1Q9QZM3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Gm15487-201ENSMUST00000122373 465 ntBASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Clcf1Q9QZM3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Gm14719-201ENSMUST00000121891 340 ntBASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 AA619741-201ENSMUST00000195095 646 ntBASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Mir125a-201ENSMUST00000083545 68 ntBASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clcf1Q9QZM3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clcf1Q9QZM3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clcf1Q9QZM3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clcf1Q9QZM3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clcf1Q9QZM3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clcf1Q9QZM3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms