Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.03■□□□□ -0
Cpsf3Q9QXK7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cpsf3Q9QXK7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Gm13385-201ENSMUST00000121089 220 ntBASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Gm28760-201ENSMUST00000185995 736 ntBASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Gm29741-201ENSMUST00000192667 421 ntBASIC15.02■□□□□ -0
Cpsf3Q9QXK7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cpsf3Q9QXK7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.02□□□□□ -0.01
Cpsf3Q9QXK7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf3Q9QXK7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cpsf3Q9QXK7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf3Q9QXK7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf3Q9QXK7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf3Q9QXK7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf3Q9QXK7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Gm8927-201ENSMUST00000181978 981 ntBASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Gm3222-201ENSMUST00000071282 990 ntBASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf3Q9QXK7 Gm12020-201ENSMUST00000119030 2042 ntBASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 AC139580.1-202ENSMUST00000223574 928 ntBASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf3Q9QXK7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms