Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.52□□□□□ -0.41
Trem1Q9JKE2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Olfr129-201ENSMUST00000122318 993 ntBASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Mir6982-201ENSMUST00000184354 68 ntBASIC12.51□□□□□ -0.41
Trem1Q9JKE2 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trem1Q9JKE2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm8318-201ENSMUST00000182954 872 ntBASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm7506-201ENSMUST00000207758 815 ntBASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms