Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chaf1bQ9D0N7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gm16198-201ENSMUST00000118766 670 ntBASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gm13597-201ENSMUST00000121239 375 ntBASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gm2272-201ENSMUST00000194903 582 ntBASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gm10060-201ENSMUST00000212002 111 ntBASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gm15590-201ENSMUST00000078419 552 ntBASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chaf1bQ9D0N7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.15□□□□□ -0.3
Chaf1bQ9D0N7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Chaf1bQ9D0N7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chaf1bQ9D0N7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms