Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ddx47Q9CWX9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx47Q9CWX9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx47Q9CWX9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx47Q9CWX9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx47Q9CWX9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx47Q9CWX9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx47Q9CWX9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx47Q9CWX9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx47Q9CWX9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm17971-201ENSMUST00000190239 806 ntBASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx47Q9CWX9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Gm6550-201ENSMUST00000187574 993 ntBASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ddx47Q9CWX9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Gm15173-201ENSMUST00000122049 433 ntBASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms