Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Gm5587-201ENSMUST00000206270 674 ntBASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39lQ9CQD0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.96
Rpl39lQ9CQD0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Rpl39lQ9CQD0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Rpl39lQ9CQD0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC9.09□□□□□ -0.96
Rpl39lQ9CQD0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Nudt18-203ENSMUST00000228768 1578 ntBASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39lQ9CQD0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms