Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Gm9550-201ENSMUST00000161130 862 ntBASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Gm42550-201ENSMUST00000201553 960 ntBASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 AA914427-201ENSMUST00000193194 1166 ntBASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Gm24447-201ENSMUST00000083977 338 ntBASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh23Q99PF4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Gm38317-201ENSMUST00000195564 343 ntBASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.92□□□□□ -0.18
Cdh23Q99PF4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Gm7809-201ENSMUST00000153199 742 ntBASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh23Q99PF4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms